SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243877
Gene Symbol: TOB1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863481ACT>T COSM392126 LUAD-RT-S01699 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-5p ctttacCACTGCCActt UGGCAGUG m8a Disrupted HPKTB_4832_G6080.1_48940841
hsa-miR-34c-5p ctttacCACTGCCactt AGGCAGUG m7b Disrupted HPKTB_4832_G6080.1_48940841
hsa-miR-449a ctttacCACTGCCActt UGGCAGUG m8a Disrupted HPKTB_4832_G6080.1_48940841
hsa-miR-449b-5p ctttacCACTGCCactt AGGCAGUG m7b Disrupted HPKTB_4832_G6080.1_48940841
hsa-miR-4736 ctttACCTGCCactt AGGCAGGU m7b Created HPKTB_4832_G6080.1_48940841
hsa-miR-7150 ctttaCCTGCCActt CUGGCAGG m7b Created HPKTB_4832_G6080.1_48940841

Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863191ATTTT>T COSM981328 TCGA-D1-A101-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 ggaaTTTTTCCtaat UGGAAAAA m7b Created HPKTB_4830_G6078.1_48940542

Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863189C>T COSM3519459 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 taTTTTTCCtaatat UGGAAAAA m7b (m7b->m6b) HPKTB_4830_G6078.1_48940542
hsa-miR-4496 tattTTTCCTaatat GAGGAAAC m6b Disrupted HPKTB_4830_G6078.1_48940542

Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863178G>A COSM4974602 1N33-VS-1T33 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-192-5p atatgcaAGGTCAag CUGACCUA m6b Created HPKTB_4830_G6078.1_48940542
hsa-miR-215-5p atatgcaAGGTCAag AUGACCUA m6b Created HPKTB_4830_G6078.1_48940542
hsa-miR-3200-3p atatGCAAGGTcaag CACCUUGC m7b Created HPKTB_4830_G6078.1_48940542
hsa-miR-448 ATATGCAAggtcaag UUGCAUAU m8a Created HPKTB_4830_G6078.1_48940542
hsa-miR-4725-5p atatgCAGGGTCaag AGACCCUG m7b Disrupted HPKTB_4830_G6078.1_48940542
hsa-miR-504-5p atatgCAGGGTCaag AGACCCUG m7b Disrupted HPKTB_4830_G6078.1_48940542
hsa-miR-6759-3p atatgcAAGGTCAag UGACCUUU m7a Created HPKTB_4830_G6078.1_48940542
hsa-miR-6841-3p ataTGCAAGGTcaag ACCUUGCA m8a Created HPKTB_4830_G6078.1_48940542

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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