SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001242851
Gene Symbol: RNF146
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.127286685C>T COSM4920890 TCGA-DD-A3A9-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4773 acgagtcCTGTTCTa CAGAACAG m7b Disrupted HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964
hsa-miR-4700-3p acgaGTCCTGTtcta CACAGGAC m7b Disrupted HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964
hsa-miR-4432 acGAGTCTTgttcta AAAGACUC m7b (m6b->m7b) HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964

Mutation Mutation ID Sample Name Cancer Type
chr6:g.127286675C>T COSM3171849 LOVO [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4790-5p aggAAAGCGAacgag AUCGCUUU m7b Disrupted HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964
hsa-miR-4315 agGAAAGCGaacgag CCGCUUUC m7b (m7b->m6b) HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964
hsa-miR-3124-3p AGGAAAGTgaacgag ACUUUCCU m8a Created HHKTB_2579_NM_030963|457|496|38.3305293342505|0.485001586240964

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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