SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001242524
Gene Symbol: HLA-DPA1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.33067703T>A COSN9780788 AOCS-058-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p atGTATTATTaatta AAUAAUAC m8a Created HPSLB_6559_G8003.1_33035467
hsa-miR-374c-5p aTGTATTATtaatta AUAAUACA m8a (m7a->m8a) HPSLB_6559_G8003.1_33035467
hsa-miR-548c-3p atgtATTTTTaatta CAAAAAUC m6b Disrupted HPSLB_6559_G8003.1_33035467
hsa-miR-5692b atgTATTATTaatta AAUAAUAU m7a Created HPSLB_6559_G8003.1_33035467
hsa-miR-5692c atgTATTATTaatta AAUAAUAU m7a Created HPSLB_6559_G8003.1_33035467
hsa-miR-655-3p aTGTATTATtaatta AUAAUACA m8a (m7a->m8a) HPSLB_6559_G8003.1_33035467

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser