SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001204478
Gene Symbol: TVP23C-CDRT4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.15537193A>C COSN8602393 2275_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6839-3p ttAAACCCAtctaca UUGGGUUU m7b (m6b->m7b) HPSLB_3293_G4008.1_15440511
hsa-miR-629-5p tTAAACCCAtctaca UGGGUUUA m8a (m7a->m8a) HPSLB_3293_G4008.1_15440511
hsa-miR-509-3p ttaaACCAATCtaca UGAUUGGU m7b Disrupted HPSLB_3293_G4008.1_15440511
hsa-miR-376a-5p ttaaaccAATCTACa GUAGAUUC m7a Disrupted HPSLB_3293_G4008.1_15440511
hsa-miR-376a-2-5p ttaaaccAATCTACa GGUAGAUU m7b Disrupted HPSLB_3293_G4008.1_15440511
hsa-miR-29b-2-5p ttAAACCAatctaca CUGGUUUC m6b Disrupted HPSLB_3293_G4008.1_15440511
hsa-miR-299-5p tTAAACCAatctaca UGGUUUAC m7a Disrupted HPSLB_3293_G4008.1_15440511

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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