SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001199917
Gene Symbol: PGM3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.83190853A>C COSM283976 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-599 acaGACACAAtccac GUUGUGUC m7b Created HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536
hsa-miR-4288 aCAGACAAaatccac UUGUCUGC m7a Disrupted HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536
hsa-miR-3167 acagacaAAATCCac AGGAUUUC m6b Disrupted HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536
hsa-miR-1290 acagacAAAATCCAc UGGAUUUU m8a Disrupted HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536
hsa-miR-1231 aCAGACACaatccac GUGUCUGG m7a Created HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536

Mutation Mutation ID Sample Name Cancer Type
chr6:g.83190842A>G COSM4803768 CHC1704T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-337-3p ccacTATAGGAGtca CUCCUAUA m8a Disrupted HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536
hsa-miR-2116-3p ccactATGGGAGtca CCUCCCAU m7b Created HHKTB_1941_AB032081|177|216|44.5462908479128|0.74996057720536

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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