SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001195622
Gene Symbol: TOPORS

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.32543161C>T COSM273371 TCGA-AA-3966-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-942-3p ggaGCCATGTctcag CACAUGGC m7b Created HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-6863 ggagcCACGTCTcag UAGACGUG m7b Disrupted HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32543160G>T COSM753656 TCGA-39-5031-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6863 gagcCACGTCTcaga UAGACGUG m7b Disrupted HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-1253 gagccaCTTCTCaga AGAGAAGA m6b Created HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-4329 gagccacGTCTCAGa CCUGAGAC m7b Disrupted HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-4795-5p gagCCACTTCTcaga AGAAGUGG m8a Created HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-4251 gagccacTTCTCAGa CCUGAGAA m7b Created HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32543130C>T COSM1108191 TCGA-AP-A0LT-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-616-3p cCAATGACgacctaa AGUCAUUG m7b Disrupted HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-431-3p ccaatgACGACCTaa CAGGUCGU m7b Disrupted HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123
hsa-miR-370-5p ccaatgaTGACCTaa CAGGUCAC m6b Created HHKTB_1901_NM_005802|1524|1563|44.9606749488236|0.349207395066123

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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