SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001193552
Gene Symbol: ZNF850

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36748714C>T COSM3822832 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4781-3p tCAACATTagcaaat AAUGUUGG m7a Created HPSLB_3900_G4746.1_37239622
hsa-miR-628-5p tcaacaTCAGCAaat AUGCUGAC m6b Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-8075 tcaaCATCAGCAaat UGCUGAUG m8a Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-33a-3p tcAACATTagcaaat CAAUGUUU m6b Created HPSLB_3900_G4746.1_37239622
hsa-miR-409-3p tCAACATTagcaaat GAAUGUUG m7b Created HPSLB_3900_G4746.1_37239622
hsa-miR-4502 tcaaCATCAGCaaat GCUGAUGA m7a Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-4639-5p tcaacaTTAGCAAat UUGCUAAG m7a Created HPSLB_3900_G4746.1_37239622
hsa-miR-4781-3p tCAACATTagcaaat AAUGUUGG m7a Created HPSLB_3900_G4746.1_37239622
hsa-miR-628-5p tcaacaTCAGCAaat AUGCUGAC m6b Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-8075 tcaaCATCAGCAaat UGCUGAUG m8a Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-4639-5p tcaacaTTAGCAAat UUGCUAAG m7a Created HPSLB_3900_G4746.1_37239622
hsa-miR-4502 tcaaCATCAGCaaat GCUGAUGA m7a Disrupted HPSLB_3900_G4746.1_37239622
hsa-miR-409-3p tCAACATTagcaaat GAAUGUUG m7b Created HPSLB_3900_G4746.1_37239622
hsa-miR-33a-3p tcAACATTagcaaat CAAUGUUU m6b Created HPSLB_3900_G4746.1_37239622

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36748636C>T COSM4854319 TCGA-EK-A3GK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p acTAATTCAacatca GUGAAUUA m7b (m7b->m6b) HPSLB_3899_G4745.1_37239549
hsa-miR-653-5p actaaTTCAACAtca GUGUUGAA m7b Disrupted HPSLB_3899_G4745.1_37239549

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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