SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001193289
Gene Symbol: APOBEC3A_B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.38989481C>T COSM4501633 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ar-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548bb-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548b-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ay-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548au-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548as-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548c-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548aq-5p acacatTTACTTTCa GAAAGUAA m8a Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ap-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548am-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ak acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ah-5p acacatTCACTTTca AAAAGUGA m7b Disrupted HPSLB_4868_G5933.1_39385481
hsa-miR-548ae-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548o-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-8054 acacattTACTTTCa GAAAGUAC m7a Created HPSLB_4868_G5933.1_39385481
hsa-miR-559 acacatTTACTTTca UAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548y acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548w acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ad-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548j-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548i acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548h-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548d-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-3609 acacatTCACTTTca CAAAGUGA m7b Disrupted HPSLB_4868_G5933.1_39385481
hsa-miR-1257 acaCATTCACTttca AGUGAAUG m8a Disrupted HPSLB_4868_G5933.1_39385481
hsa-miR-526b-3p acacattCACTTTCa GAAAGUGC m7a Disrupted HPSLB_4868_G5933.1_39385481
hsa-miR-548a-5p acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481
hsa-miR-548ab acacatTTACTTTca AAAAGUAA m7b Created HPSLB_4868_G5933.1_39385481

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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