SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001190263
Gene Symbol: C1D
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68047239C>T COSM3582629 TCGA-EB-A4IS-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr2:g.68047239C>G COSM3582630 TCGA-EE-A185-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68047215G>T COSM347634 LUAD-TLLGS [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4503 agaTGCTTAAgacca UUUAAGCA m7b Created HPSLB_4362_G5319.1_68274371
hsa-miR-4310 agATGCTGaagacca GCAGCAUU m6b Disrupted HPSLB_4362_G5319.1_68274371
hsa-miR-7157-5p agATGCTGAagacca UCAGCAUU m7a (m7a->m6a) HPSLB_4362_G5319.1_68274371
hsa-miR-6792-5p agaTGCTTAagacca GUAAGCAG m6b Created HPSLB_4362_G5319.1_68274371

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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