SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001184782
Gene Symbol: CXorf57

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.106612451A>G COSM4105631 TCGA-CD-5801-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3653-3p aTTCTTAGagttggc CUAAGAAG m7a Created HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682
hsa-miR-3658 aTTCTTAAAgttggc UUUAAGAA m8a (m8a->m7a) HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682
hsa-miR-618 attctTAGAGTTggc AAACUCUA m7b Created HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682

Mutation Mutation ID Sample Name Cancer Type
chrX:g.106612435T>C COSM1112540 TCGA-B5-A0K9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3171 tctcgTACATCaaaa AGAUGUAU m6b Created HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682
hsa-let-7d-3p tcTCGTATAtcaaaa CUAUACGA m7b (m7b->m6b) HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682

Mutation Mutation ID Sample Name Cancer Type
chrX:g.106612428T>A COSM372075 LUAD-NYU259 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3174 tgaACTCACTcgtat UAGUGAGU m7b Created HHKTB_3224_NM_018015|496|535|32.7363439719545|0.356305376322682

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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