SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001172105
Gene Symbol: GRAMD1C

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.113933604G>A COSM4767131 I-02 [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1206 ctatacCATGAACAg UGUUCAUG m8a Created HPTA4_2660_G12022.1_113652448
hsa-miR-1206 ctatacCATGAACAg UGUUCAUG m8a Created HPTA4_2660_G12022.1_113652448

Mutation Mutation ID Sample Name Cancer Type
chr3:g.113933603C>T COSM110000 12T [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3681-3p tctatACTGTGaaca ACACAGUG m6b Created HPTA4_2660_G12022.1_113652448
hsa-miR-27b-3p tctatACTGTGAAca UUCACAGU m8a Created HPTA4_2660_G12022.1_113652448
hsa-miR-27a-3p tctatACTGTGAAca UUCACAGU m8a Created HPTA4_2660_G12022.1_113652448
hsa-miR-216a-3p tctatACTGTGAaca UCACAGUG m7a Created HPTA4_2660_G12022.1_113652448
hsa-miR-144-3p tctATACTGTgaaca UACAGUAU m7b Created HPTA4_2660_G12022.1_113652448
hsa-miR-128-3p tctatACTGTGAaca UCACAGUG m7a Created HPTA4_2660_G12022.1_113652448

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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