SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001164145
Gene Symbol: CHAMP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.114326108C>T COSM2264780 LS513 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4775 taAAAATTAtgtagc UUAAUUUU m7b (m6b->m7b) HPTA1_3442_G4784.1_115091582

Mutation Mutation ID Sample Name Cancer Type
chr13:g.114324142C>T COSM2264747 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6844 agttgaACAAAGAAa UUCUUUGU m8a Disrupted HPTA1_3441_G4783.1_115089604
hsa-miR-6739-3p agttGAACAAagaaa AUUGUUCU m6b Disrupted HPTA1_3441_G4783.1_115089604
hsa-miR-4272 aGTTGAATaaagaaa CAUUCAAC m7b Created HPTA1_3441_G4783.1_115089604

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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