SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001161465
Gene Symbol: JMJD4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.227733966C>T COSM4503184 CSCC-37-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4733-5p atgagttTTGGGATg AAUCCCAA m7b Created HHKTB_2554_NM_023007|624|663|38.3305293342505|0.893215213929928
hsa-miR-186-3p atgagtTTTGGGatg GCCCAAAG m6b Created HHKTB_2554_NM_023007|624|663|38.3305293342505|0.893215213929928
hsa-miR-548o-3p atgAGTTTTGGgatg CCAAAACU m8a Created HHKTB_2554_NM_023007|624|663|38.3305293342505|0.893215213929928
hsa-miR-1323 atgAGTTTTGggatg UCAAAACU m7b Created HHKTB_2554_NM_023007|624|663|38.3305293342505|0.893215213929928

Mutation Mutation ID Sample Name Cancer Type
chr1:g.227733961A>G COSM1601772 BN13T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p ttctGGGATGCactg CGCAUCCC m7b Disrupted HHKTB_2554_NM_023007|624|663|38.3305293342505|0.893215213929928

Mutation Mutation ID Sample Name Cancer Type
chr1:g.227733952A>T COSM4693858 T3658 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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