SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001161334
Gene Symbol: HIST2H2BF
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812309G>A COSM161554 PD4120a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-876-5p atccagcGAAATCCg UGGAUUUC m7b Disrupted HPTA1_1121_G1542.1_149783869
hsa-miR-1287-5p ATCCAGCAaaatccg UGCUGGAU m8a Created HPTA1_1121_G1542.1_149783869
hsa-miR-1290 atccagcAAAATCCg UGGAUUUU m7b Created HPTA1_1121_G1542.1_149783869
hsa-miR-3167 atccagcGAAATCCg AGGAUUUC m7b Disrupted HPTA1_1121_G1542.1_149783869
hsa-miR-639 atcCAGCGAaatccg AUCGCUGC m6b Disrupted HPTA1_1121_G1542.1_149783869
hsa-miR-6885-3p atccAGCAAAatccg CUUUGCUU m6b Created HPTA1_1121_G1542.1_149783869

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812304C>T COSM3473271 TCGA-D3-A3C7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3167 gcGAAATCCgctcct AGGAUUUC m7b (m7b->m6b) HPTA1_1121_G1542.1_149783869
hsa-miR-876-5p gcGAAATCCgctcct UGGAUUUC m7b (m7b->m6b) HPTA1_1121_G1542.1_149783869

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812144G>A COSM4690469 T3446 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4641 aggcCATGGGCAtca UGCCCAUG m8a Disrupted HPTA1_1120_G1541.1_149783691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812138C>T COSM1498146 TCGA-73-7499-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-3p tgggcATCATGAact AUCAUGAU m7b Disrupted HPTA1_1120_G1541.1_149783691
hsa-miR-365b-3p tGGGCATTAtgaact UAAUGCCC m8a (m7a->m8a) HPTA1_1120_G1541.1_149783691
hsa-miR-365a-3p tGGGCATTAtgaact UAAUGCCC m8a (m7a->m8a) HPTA1_1120_G1541.1_149783691
hsa-miR-1322 tggGCATCATgaact GAUGAUGC m7b Disrupted HPTA1_1120_G1541.1_149783691
hsa-miR-1206 tgggcatCATGAACt UGUUCAUG m7b Disrupted HPTA1_1120_G1541.1_149783691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812138C>A COSM675626 TCGA-18-3417-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1206 tgggcatCATGAACt UGUUCAUG m7b Disrupted HPTA1_1120_G1541.1_149783691
hsa-miR-1322 tggGCATCATgaact GAUGAUGC m7b Disrupted HPTA1_1120_G1541.1_149783691
hsa-miR-433-3p tgggcATCATGAact AUCAUGAU m7b Disrupted HPTA1_1120_G1541.1_149783691
hsa-miR-4528 tgggcATAATGAact UCAUUAUA m7a Created HPTA1_1120_G1541.1_149783691
hsa-miR-6853-3p tgggcatAATGAACt UGUUCAUU m7b Created HPTA1_1120_G1541.1_149783691
hsa-miR-4633-5p tgGGCATAatgaact AUAUGCCU m6b Created HPTA1_1120_G1541.1_149783691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149812047C>A COSM3671385 TCGA-G9-6342-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-5p cacatCCCGCGAgat UUCGCGGG m7b Disrupted HPTA1_1119_G1540.1_149783598
hsa-miR-1287-5p cacATCCAGCgagat UGCUGGAU m7b Created HPTA1_1119_G1540.1_149783598
hsa-miR-4764-5p CACATCCAgcgagat UGGAUGUG m8a Created HPTA1_1119_G1540.1_149783598

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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