SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001152
Gene Symbol: SLC25A5
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.119471078C>T COSN2534351
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 gaTTTTTCCccctgt UGGAAAAA m7b (m7b->m6b) HPRO8_15420_G20622.1_118605051
hsa-miR-4668-5p gatTTTTCCCcctgt AGGGAAAA m7b Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-4716-3p gattttTCCCCCTgt AAGGGGGA m7b Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-625-5p gatttTTCCCCCTgt AGGGGGAA m8a Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-6783-5p gattttTTCCCCTgt UAGGGGAA m7b Created HPRO8_15420_G20622.1_118605051
hsa-miR-6794-5p gattttTCCCCCTGt CAGGGGGA m8a Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-6798-5p gatttttCCCCCTGt CCAGGGGG m7b Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-3148 gaTTTTTCCccctgt UGGAAAAA m7b (m7b->m6b) HPRO8_15420_G20622.1_118605051
hsa-miR-4668-5p gatTTTTCCCcctgt AGGGAAAA m7b Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-4716-3p gattttTCCCCCTgt AAGGGGGA m7b Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-625-5p gatttTTCCCCCTgt AGGGGGAA m8a Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-6783-5p gattttTTCCCCTgt UAGGGGAA m7b Created HPRO8_15420_G20622.1_118605051
hsa-miR-6794-5p gattttTCCCCCTGt CAGGGGGA m8a Disrupted HPRO8_15420_G20622.1_118605051
hsa-miR-6798-5p gatttttCCCCCTGt CCAGGGGG m7b Disrupted HPRO8_15420_G20622.1_118605051

Mutation Mutation ID Sample Name Cancer Type
chrX:g.119469894G>A COSM2723491 TCGA-ER-A19S-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p ttgcaggGAATCTGg ACAGAUUC m7b Disrupted HPRO8_15419_G20621.1_118603854
hsa-miR-3074-5p ttGCAGGAAatctgg GUUCCUGC m7b (m6b->m7b) HPRO8_15419_G20621.1_118603854
hsa-miR-3938 ttgcAGGGAATctgg AAUUCCCU m7b Disrupted HPRO8_15419_G20621.1_118603854
hsa-miR-670-5p ttgCAGGGAatctgg GUCCCUGA m6b Disrupted HPRO8_15419_G20621.1_118603854
hsa-miR-6752-3p ttGCAGGGAatctgg UCCCUGCC m7a (m7a->m6a) HPRO8_15419_G20621.1_118603854

Mutation Mutation ID Sample Name Cancer Type
chrX:g.119469881T>G COSM1465204 CHC322T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4732-5p ttttgGCTCTACttt UGUAGAGC m7b Disrupted HPRO8_15419_G20621.1_118603854
hsa-miR-562 ttttggcGCTACTTt AAAGUAGC m7b Created HPRO8_15419_G20621.1_118603854

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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