SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145417
Gene Symbol: MSL2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.136151797C>T COSM204724 TCGA-AA-3518-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4330 cattATCTGAGGccc CCUCAGAU m8a Created HPKTB_7513_G9575.1_135870638

Mutation Mutation ID Sample Name Cancer Type
chr3:g.136151291C>T COSM3123220 8066067 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p gcattAATGTGActa UUCACAUU m7b Created HPKTB_7512_G9574.1_135870142
hsa-miR-569 gCATTAACgtgacta AGUUAAUG m7b Disrupted HPKTB_7512_G9574.1_135870142
hsa-miR-323a-3p gcatTAATGTGacta CACAUUAC m7a Created HPKTB_7512_G9574.1_135870142
hsa-miR-23c gcattAATGTGActa AUCACAUU m7b Created HPKTB_7512_G9574.1_135870142
hsa-miR-23b-3p gcattAATGTGActa AUCACAUU m7b Created HPKTB_7512_G9574.1_135870142
hsa-miR-23a-3p gcattAATGTGActa AUCACAUU m7b Created HPKTB_7512_G9574.1_135870142

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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