SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145353
Gene Symbol: ELF1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.40933963T>C COSM4907442 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4693-5p catACAGTAacactc AUACUGUG m6b Disrupted HPSLB_2196_G2647.1_41508085
hsa-miR-4718 caTACAGCaacactc AGCUGUAC m6b Created HPSLB_2196_G2647.1_41508085
hsa-miR-4999-5p cATACAGCAacactc UGCUGUAU m8a (m7a->m8a) HPSLB_2196_G2647.1_41508085
hsa-miR-1183 caTACAGTaacactc CACUGUAG m6b Disrupted HPSLB_2196_G2647.1_41508085
hsa-miR-4693-5p catACAGTAacactc AUACUGUG m6b Disrupted HPSLB_2196_G2647.1_41508085
hsa-miR-4718 caTACAGCaacactc AGCUGUAC m6b Created HPSLB_2196_G2647.1_41508085
hsa-miR-4999-5p cATACAGCAacactc UGCUGUAU m8a (m7a->m8a) HPSLB_2196_G2647.1_41508085
hsa-miR-1183 caTACAGTaacactc CACUGUAG m6b Disrupted HPSLB_2196_G2647.1_41508085

Mutation Mutation ID Sample Name Cancer Type
chr13:g.40933934CAG>G COSM947402 TCGA-D1-A0ZO-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-5p ctcacAACAGTTatagc AACUGUUU m7a Disrupted HPSLB_2196_G2647.1_41508085
hsa-miR-581 ctCACAAGttatagc UCUUGUGU m6b Created HPSLB_2196_G2647.1_41508085

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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