SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145339
Gene Symbol: MDM2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.68839838T>C COSM276042 TCGA-AA-A00N-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-3p gctaaCTCATTTccc CAAAUGAG m7b Created HPSLB_1744_G2109.1_69233605
hsa-miR-4424 gcTAACTCatttccc AGAGUUAA m6b Created HPSLB_1744_G2109.1_69233605
hsa-miR-5093 gctaactCATTTCCc AGGAAAUG m7b Created HPSLB_1744_G2109.1_69233605

Mutation Mutation ID Sample Name Cancer Type
chr12:g.68839816A>G COSM942911 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4452 gacaaccAATTCAAa UUGAAUUC m7a Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-3610 gacaaCCGATTCaaa GAAUCGGA m7a Created HPSLB_1744_G2109.1_69233605
hsa-miR-219b-3p gacaacCAATTCaaa AGAAUUGC m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-183-3p gacaaccAATTCAaa GUGAAUUA m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-219a-2-3p gacaacCAATTCaaa AGAAUUGU m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-183-3p gacaaccAATTCAaa GUGAAUUA m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-219a-2-3p gacaacCAATTCaaa AGAAUUGU m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-219b-3p gacaacCAATTCaaa AGAAUUGC m6b Disrupted HPSLB_1744_G2109.1_69233605
hsa-miR-3610 gacaaCCGATTCaaa GAAUCGGA m7a Created HPSLB_1744_G2109.1_69233605
hsa-miR-4452 gacaaccAATTCAAa UUGAAUUC m7a Disrupted HPSLB_1744_G2109.1_69233605

Mutation Mutation ID Sample Name Cancer Type
chr12:g.68839593G>A COSM942910 TCGA-D1-A17A-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6762-3p tatAGCAGCCAagaa UGGCUGCU m8a Disrupted HPSLB_1743_G2108.1_69233356
hsa-miR-659-3p tatagcAACCAAGaa CUUGGUUC m7a Created HPSLB_1743_G2108.1_69233356
hsa-miR-656-5p tataGCAACCaagaa AGGUUGCC m6b Created HPSLB_1743_G2108.1_69233356
hsa-miR-647 tataGCAGCCAagaa GUGGCUGC m7b Disrupted HPSLB_1743_G2108.1_69233356
hsa-miR-604 tataGCAGCCaagaa AGGCUGCG m6b Disrupted HPSLB_1743_G2108.1_69233356
hsa-miR-647 tataGCAGCCAagaa GUGGCUGC m7b Disrupted HPSLB_1743_G2108.1_69233356
hsa-miR-6762-3p tatAGCAGCCAagaa UGGCUGCU m8a Disrupted HPSLB_1743_G2108.1_69233356
hsa-miR-659-3p tatagcAACCAAGaa CUUGGUUC m7a Created HPSLB_1743_G2108.1_69233356
hsa-miR-656-5p tataGCAACCaagaa AGGUUGCC m6b Created HPSLB_1743_G2108.1_69233356
hsa-miR-604 tataGCAGCCaagaa AGGCUGCG m6b Disrupted HPSLB_1743_G2108.1_69233356

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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