SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001143887
Gene Symbol: COPS2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49145003AG>G COSM23461 NCI-H209 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49127567A>T COSN8745829 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-657 acaaatAACCTGCaa GGCAGGUU m7b Disrupted HPSLC_7062_G8352.1_49419767
hsa-miR-1286 acaaataTCCTGCAa UGCAGGAC m7a Created HPSLC_7062_G8352.1_49419767
hsa-miR-154-5p acaaATAACCTgcaa UAGGUUAU m7b Disrupted HPSLC_7062_G8352.1_49419767
hsa-miR-3145-3p acAAATATCctgcaa AGAUAUUU m7b (m6b->m7b) HPSLC_7062_G8352.1_49419767
hsa-miR-3665 acaaataACCTGCaa AGCAGGUG m6b Disrupted HPSLC_7062_G8352.1_49419767
hsa-miR-4722-5p acaaataTCCTGCaa GGCAGGAG m6b Created HPSLC_7062_G8352.1_49419767

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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