SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001143887
Gene Symbol: COPS2

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr15:g.49145003AG>G COSM23461 NCI-H209 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr15:g.49134414T>G COSM3420390 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49127567A>T COSN8745829 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4722-5p acaaataTCCTGCaa GGCAGGAG m6b Created HPSLB_2733_G3290.1_49419757
hsa-miR-1286 acaaataTCCTGCAa UGCAGGAC m7a Created HPSLB_2733_G3290.1_49419757
hsa-miR-154-5p acaaATAACCTgcaa UAGGUUAU m7b Disrupted HPSLB_2733_G3290.1_49419757
hsa-miR-3145-3p acAAATATCctgcaa AGAUAUUU m7b (m6b->m7b) HPSLB_2733_G3290.1_49419757
hsa-miR-3665 acaaataACCTGCaa AGCAGGUG m6b Disrupted HPSLB_2733_G3290.1_49419757
hsa-miR-657 acaaatAACCTGCaa GGCAGGUU m7b Disrupted HPSLB_2733_G3290.1_49419757

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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