SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001143887
Gene Symbol: COPS2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49127567A>T COSN8745829 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4722-5p acaaataTCCTGCaa GGCAGGAG m6b Created HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479
hsa-miR-657 acaaatAACCTGCaa GGCAGGUU m7b Disrupted HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479
hsa-miR-3665 acaaataACCTGCaa AGCAGGUG m6b Disrupted HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479
hsa-miR-3145-3p acAAATATCctgcaa AGAUAUUU m7b (m6b->m7b) HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479
hsa-miR-154-5p acaaATAACCTgcaa UAGGUUAU m7b Disrupted HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479
hsa-miR-1286 acaaataTCCTGCAa UGCAGGAC m7a Created HHHSH_805_COPS2|NM_001143887|exon_utr3|-7.18296974714036|0.774561992076479

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser