SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001142416
Gene Symbol: AIMP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.106348909A>G COSN1284818 HCC18T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-581 cACACAAGAcatttt UCUUGUGU m8a (m7a->m8a) HPSLB_5496_G6713.1_107270053
hsa-miR-5010-3p cACACAAAAcatttt UUUUGUGU m8a (m8a->m7a) HPSLB_5496_G6713.1_107270053
hsa-miR-19a-5p cacaCAAAACatttt AGUUUUGC m6b Disrupted HPSLB_5496_G6713.1_107270053
hsa-miR-4307 cacacAAAACATTtt AAUGUUUU m8a Disrupted HPSLB_5496_G6713.1_107270053
hsa-miR-33a-3p cacacaAAACATTtt CAAUGUUU m7b Disrupted HPSLB_5496_G6713.1_107270053
hsa-miR-2113 caCACAAAacatttt AUUUGUGC m6b Disrupted HPSLB_5496_G6713.1_107270053
hsa-miR-19b-2-5p cacaCAAAACatttt AGUUUUGC m6b Disrupted HPSLB_5496_G6713.1_107270053
hsa-miR-19b-1-5p cacaCAAAACatttt AGUUUUGC m6b Disrupted HPSLB_5496_G6713.1_107270053

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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