SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001142319
Gene Symbol: C2orf44

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.24038186GAAC>C COSM1019003 TCGA-BS-A0TE-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4778-3p gGAAGAAGAaccttcaat UCUUCUUC m8a (m8a->m7a) HPRO8_8604_G11350.1_24261044
hsa-miR-22-5p ggaaGAAGAACcttcaat AGUUCUUC m7b Disrupted HPRO8_8604_G11350.1_24261044
hsa-miR-4659a-3p ggaAGAAGAAccttcaat UUUCUUCU m7b Disrupted HPRO8_8604_G11350.1_24261044
hsa-miR-4659b-3p ggaAGAAGAAccttcaat UUUCUUCU m7b Disrupted HPRO8_8604_G11350.1_24261044

Mutation Mutation ID Sample Name Cancer Type
chr2:g.24031021C>T COSM2910752 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-3p ccaGGTGCTGtttct UCAGCACC m7b Disrupted HPRO8_8603_G11349.1_24253899
hsa-miR-6804-3p cCAGGTGCtgtttct CGCACCUG m7b Disrupted HPRO8_8603_G11349.1_24253899

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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