SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001142308
Gene Symbol: MALRD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.19490907CA>A COSN1116529 HCC36T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-568 ttTTATACAcataatt AUGUAUAA m7b (m7b->m6b) HPSLC_2757_G3239.1_19779837
hsa-miR-511-3p ttttaTACACATaatt AAUGUGUA m7b Disrupted HPSLC_2757_G3239.1_19779837
hsa-miR-340-5p tTTTATAAcataatt UUAUAAAG m7a Created HPSLC_2757_G3239.1_19779837
hsa-miR-223-5p ttttATACACataatt CGUGUAUU m6b Disrupted HPSLC_2757_G3239.1_19779837

Mutation Mutation ID Sample Name Cancer Type
chr10:g.19165838G>C COSN15437016 AOCS-160-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4724-5p ttctGTTCAGTTgta AACUGAAC m8a Created HPSLC_2756_G3238.1_19454750
hsa-miR-4709-5p ttCTGTTGagttgta ACAACAGU m6b Disrupted HPSLC_2756_G3238.1_19454750
hsa-miR-421 ttCTGTTGAgttgta AUCAACAG m7b (m7b->m6b) HPSLC_2756_G3238.1_19454750

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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