SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001136051
Gene Symbol: LRIG3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.58872638T>C COSM192730 TCGA-AA-A01P-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ba acatttgTACCTTTa AAAGGUAA m7a Disrupted HPKTB_2793_G3540.1_59266423
hsa-miR-548ag acatttgTACCTTTa AAAGGUAA m7a Disrupted HPKTB_2793_G3540.1_59266423
hsa-miR-548ai acatttgTACCTTTa AAAGGUAA m7a Disrupted HPKTB_2793_G3540.1_59266423
hsa-miR-4735-3p acatttGCACCTTTa AAAGGUGC m8a Created HPKTB_2793_G3540.1_59266423
hsa-miR-548m acatttgTACCTTTa CAAAGGUA m7b Disrupted HPKTB_2793_G3540.1_59266423
hsa-miR-570-5p acatttgTACCTTTa AAAGGUAA m7a Disrupted HPKTB_2793_G3540.1_59266423
hsa-miR-19b-3p acaTTTGCACcttta UGUGCAAA m7b Created HPKTB_2793_G3540.1_59266423
hsa-miR-18a-5p acatttGCACCTTta UAAGGUGC m7b Created HPKTB_2793_G3540.1_59266423
hsa-miR-18b-5p acatttGCACCTTta UAAGGUGC m7b Created HPKTB_2793_G3540.1_59266423
hsa-miR-19a-3p acaTTTGCACcttta UGUGCAAA m7b Created HPKTB_2793_G3540.1_59266423

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser