SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135575
Gene Symbol: SMIM13

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.11134525T>C COSM1072170 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-5p agACACTCCctcctc UGGAGUGU m7b (m6b->m7b) HPRO8_12019_G16156.1_11134773
hsa-miR-1249-5p agacacTCCCTCCTc AGGAGGGA m8a Created HPRO8_12019_G16156.1_11134773
hsa-miR-4419a agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-4510 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-4779 agacactCCCTCCTc UAGGAGGG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6127 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6129 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6130 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6133 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6797-5p agacacTCCCTCCTc AGGAGGGA m8a Created HPRO8_12019_G16156.1_11134773
hsa-miR-766-5p agacacTTCCTCCTc AGGAGGAA m8a Disrupted HPRO8_12019_G16156.1_11134773
hsa-miR-122-5p agACACTCCctcctc UGGAGUGU m7b (m6b->m7b) HPRO8_12019_G16156.1_11134773
hsa-miR-1249-5p agacacTCCCTCCTc AGGAGGGA m8a Created HPRO8_12019_G16156.1_11134773
hsa-miR-4419a agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-4510 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-4779 agacactCCCTCCTc UAGGAGGG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6127 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6129 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6130 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6133 agacaCTCCCTCctc UGAGGGAG m7b Created HPRO8_12019_G16156.1_11134773
hsa-miR-6797-5p agacacTCCCTCCTc AGGAGGGA m8a Created HPRO8_12019_G16156.1_11134773
hsa-miR-766-5p agacacTTCCTCCTc AGGAGGAA m8a Disrupted HPRO8_12019_G16156.1_11134773

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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