SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134479
Gene Symbol: LRRC8D

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.89934629T>C COSM682769 TCGA-18-3414-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6851-5p cCACCTCCgccactg AGGAGGUG m7b Created HPRO7_65_G115.1_90400194
hsa-miR-658 ccaCCTCCGCCactg GGCGGAGG m8a Created HPRO7_65_G115.1_90400194
hsa-miR-4730 ccaccTCCGCCActg CUGGCGGA m7b Created HPRO7_65_G115.1_90400194
hsa-miR-4257 ccACCTCTGccactg CCAGAGGU m7b (m7b->m6b) HPRO7_65_G115.1_90400194
hsa-miR-3689d cCACCTCCgccactg GGGAGGUG m7b Created HPRO7_65_G115.1_90400194
hsa-miR-25-5p ccacCTCCGCCactg AGGCGGAG m7b Created HPRO7_65_G115.1_90400194
hsa-miR-2467-3p ccaCCTCTGCcactg AGCAGAGG m7b Disrupted HPRO7_65_G115.1_90400194

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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