SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001134231 |
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Gene Symbol: | NT5DC2 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.52524489A>G | COSM1217968 | 587224 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4715-3p | cttGGTGGCAtggcc | GUGCCACC | m7b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-6872-3p | cttggtGGCATGGcc | CCCAUGCC | m7b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.52524475C>T | COSM1259616 | ESO-708 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4291 | ccacatCTGCTGAgg | UUCAGCAG | m7b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-214-3p | ccacatCTGCTGagg | ACAGCAGG | m6b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-4764-5p | cCACATCCgctgagg | UGGAUGUG | m7b | Disrupted | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-761 | ccacatCTGCTGagg | GCAGCAGG | m6b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-7846-3p | ccacaTCCGCTGagg | CAGCGGAG | m7a | Disrupted | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-922 | ccacaTCTGCTGagg | GCAGCAGA | m7b | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-105-3p | ccACATCCGctgagg | ACGGAUGU | m7b | (m7b->m6b) | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.52524471G>A | COSM1309350 | TCGA-G2-A2EO-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-938 | atccgcTAAGGGCAc | UGCCCUUA | m8a | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-7846-3p | aTCCGCTGagggcac | CAGCGGAG | m7a | Disrupted | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-938 | atccgcTAAGGGCAc | UGCCCUUA | m8a | Created | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |
hsa-miR-7846-3p | aTCCGCTGagggcac | CAGCGGAG | m7a | Disrupted | HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128 |