SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134231
Gene Symbol: NT5DC2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.52524627A>G COSM1239643 ESO-859 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-877-5p gaCCTCTACatggcc GUAGAGGA m7a (m7a->m6a) HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035
hsa-miR-6832-5p gacCTCTACatggcc AGUAGAGA m6b Disrupted HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035
hsa-miR-4257 gACCTCTGcatggcc CCAGAGGU m7b Created HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035
hsa-miR-3678-3p gacCTCTGCAtggcc CUGCAGAG m7b Created HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035
hsa-miR-3668 gaccTCTACATggcc AAUGUAGA m7b Disrupted HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035
hsa-miR-2467-3p gaCCTCTGCatggcc AGCAGAGG m7b (m6b->m7b) HHHSH_2585_NT5DC2|NM_001134231|exon_CDS|-7.66582756308453|-0.245812386578035

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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