SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001130831
Gene Symbol: GAS7

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.9922232C>T COSN1730705 RK063_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4518 atgatCCCTGAGgat GCUCAGGG m7b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-4441 atgaTCCCTGaggat ACAGGGAG m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-211-3p atgaTCCCTGaggat GCAGGGAC m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-1266-5p atgatCCCTGAGGat CCUCAGGG m8a Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-561-5p atgaTCCTTGAggat AUCAAGGA m7b Created HPSLB_3094_G3746.1_9825549
hsa-miR-6754-5p atgaTCCCTGaggat CCAGGGAG m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-6830-5p atgaTCCTTGaggat CCAAGGAA m6b Created HPSLB_3094_G3746.1_9825549
hsa-miR-4518 atgatCCCTGAGgat GCUCAGGG m7b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-4441 atgaTCCCTGaggat ACAGGGAG m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-211-3p atgaTCCCTGaggat GCAGGGAC m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-1266-5p atgatCCCTGAGGat CCUCAGGG m8a Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-561-5p atgaTCCTTGAggat AUCAAGGA m7b Created HPSLB_3094_G3746.1_9825549
hsa-miR-6754-5p atgaTCCCTGaggat CCAGGGAG m6b Disrupted HPSLB_3094_G3746.1_9825549
hsa-miR-6830-5p atgaTCCTTGaggat CCAAGGAA m6b Created HPSLB_3094_G3746.1_9825549

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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