SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001130058
Gene Symbol: SLC44A5

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.75202969G>A COSN8508685 AOCS-096-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4718 acattGTACAGCTaa AGCUGUAC m8a Created HHKTB_3073_NM_001130058|3039|3078|34.1866883251423|0.147542060076036
hsa-miR-22-3p acattgtGCAGCTaa AAGCUGCC m6b Disrupted HHKTB_3073_NM_001130058|3039|3078|34.1866883251423|0.147542060076036
hsa-miR-1537-5p acattgTACAGCTaa AGCUGUAA m7a Created HHKTB_3073_NM_001130058|3039|3078|34.1866883251423|0.147542060076036
hsa-let-7c-3p acaTTGTACAGctaa CUGUACAA m8a Created HHKTB_3073_NM_001130058|3039|3078|34.1866883251423|0.147542060076036

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser