| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001130009 |
|---|---|
| Gene Symbol: | GEN1 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.17781186G>A | COSM4634685 | HCT8 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-2116-5p | ctgAAGAACatctac | GGUUCUUA | m6b | Created | HPSLC_10133_G11960.1_17962466 |
| hsa-miR-22-5p | ctGAAGAACatctac | AGUUCUUC | m7b | (m6b->m7b) | HPSLC_10133_G11960.1_17962466 |
| hsa-miR-4677-5p | ctgAAGAACAtctac | UUGUUCUU | m7b | Created | HPSLC_10133_G11960.1_17962466 |
| hsa-miR-576-3p | ctgaagaACATCTac | AAGAUGUG | m6b | Created | HPSLC_10133_G11960.1_17962466 |
| hsa-miR-6515-3p | cTGAAGAGcatctac | UCUCUUCA | m7b | Disrupted | HPSLC_10133_G11960.1_17962466 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.17780778T>G | COSM3425783 | TCGA-F5-6814-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3121-3p | aaTCTATTTctgcct | UAAAUAGA | m7b | (m7b->m6b) | HPSLC_10131_G11958.1_17962047 |
| hsa-miR-3166 | aatctaTGTCTGCct | CGCAGACA | m7b | Created | HPSLC_10131_G11958.1_17962047 |
| hsa-miR-376c-3p | aaTCTATGTctgcct | AACAUAGA | m7b | (m6b->m7b) | HPSLC_10131_G11958.1_17962047 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.17780775T>G | COSM2707795 | HCC2998 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3121-3p | aggaaTCTATTTctg | UAAAUAGA | m7b | Disrupted | HPSLC_10131_G11958.1_17962047 |
| hsa-miR-376a-5p | agGAATCTAtttctg | GUAGAUUC | m7b | (m7b->m6b) | HPSLC_10131_G11958.1_17962047 |