SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001128211
Gene Symbol: NUDCD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.109271027A>G COSM3762986 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4769-3p gATGGCAGtacatta UCUGCCAU m7b Created HPSLC_19514_G23251.1_110283240

Mutation Mutation ID Sample Name Cancer Type
chr8:g.109271010C>T COSM4963923 ITNET_0151_T [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1244 AACTACTTatgtggt AAGUAGUU m8a Created HPSLC_19514_G23251.1_110283240
hsa-miR-562 aaCTACTTatgtggt AAAGUAGC m6b Created HPSLC_19514_G23251.1_110283240
hsa-miR-6869-5p aaCTACTCAtgtggt GUGAGUAG m7b (m7b->m6b) HPSLC_19514_G23251.1_110283240

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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