SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001127181
Gene Symbol: CENPL

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803164C>T COSM404313 LUAD-S01346 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p tttcTTTTGCaatac AGCAAAAU m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-25-3p tttctttTGCAATac CAUUGCAC m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-363-3p tttctttTGCAATac AAUUGCAC m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-367-3p tttctttTGCAATac AAUUGCAC m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-518a-5p tttctTTTGCAatac CUGCAAAG m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-527 tttctTTTGCAatac CUGCAAAG m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-548aj-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPSLC_1797_G2100.1_173772308
hsa-miR-548aw tttcTTTTGCAatac GUGCAAAA m7b Created HPSLC_1797_G2100.1_173772308
hsa-miR-548f-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPSLC_1797_G2100.1_173772308
hsa-miR-548g-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPSLC_1797_G2100.1_173772308
hsa-miR-548x-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPSLC_1797_G2100.1_173772308
Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803163G>A COSM899784 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803153C>A COSM4874295 TCGA-AP-A0LD-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPSLC_1797_G2100.1_173772308
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPSLC_1797_G2100.1_173772308

Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803151G>C COSM376158 LUAD-NYU704 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p acatCCACAGGatgc CCUGUGGG m7a Created HPSLC_1797_G2100.1_173772308
hsa-miR-1914-5p acatcCACAGGatgc CCCUGUGC m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-326 acatCCAGAGGatgc CCUCUGGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-3691-5p aCATCCACaggatgc AGUGGAUG m7b Created HPSLC_1797_G2100.1_173772308
hsa-miR-376b-5p acATCCACaggatgc CGUGGAUA m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-376c-5p acATCCACaggatgc GGUGGAUA m6b Created HPSLC_1797_G2100.1_173772308
hsa-miR-432-3p aCATCCAGaggatgc CUGGAUGG m7a Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-4752 acATCCACAggatgc UUGUGGAU m7b (m6b->m7b) HPSLC_1797_G2100.1_173772308
hsa-miR-4782-5p acATCCAGAggatgc UUCUGGAU m7b (m7b->m6b) HPSLC_1797_G2100.1_173772308
hsa-miR-4793-5p acatccaCAGGATGc ACAUCCUG m7b Created HPSLC_1797_G2100.1_173772308
hsa-miR-518c-5p acaTCCAGAGgatgc UCUCUGGA m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-5196-3p acatccaGAGGATGc UCAUCCUC m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-5706 acATCCAGAggatgc UUCUGGAU m7b (m7b->m6b) HPSLC_1797_G2100.1_173772308
hsa-miR-6780a-3p acatcCAGAGGAtgc CUCCUCUG m7b Disrupted HPSLC_1797_G2100.1_173772308
hsa-miR-7114-5p acaTCCACAGgatgc UCUGUGGA m7b Created HPSLC_1797_G2100.1_173772308
hsa-miR-8056 acATCCACaggatgc CGUGGAUU m6b Created HPSLC_1797_G2100.1_173772308

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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