SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001127181
Gene Symbol: CENPL

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803164C>T COSM404313 LUAD-S01346 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p tttcTTTTGCaatac AGCAAAAU m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-25-3p tttctttTGCAATac CAUUGCAC m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-363-3p tttctttTGCAATac AAUUGCAC m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-367-3p tttctttTGCAATac AAUUGCAC m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-518a-5p tttctTTTGCAatac CUGCAAAG m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-527 tttctTTTGCAatac CUGCAAAG m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-548aj-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPKTB_1087_G1342.1_173772302
hsa-miR-548aw tttcTTTTGCAatac GUGCAAAA m7b Created HPKTB_1087_G1342.1_173772302
hsa-miR-548f-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPKTB_1087_G1342.1_173772302
hsa-miR-548g-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPKTB_1087_G1342.1_173772302
hsa-miR-548x-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPKTB_1087_G1342.1_173772302
Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803163G>A COSM899784 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803153C>A COSM4874295 TCGA-AP-A0LD-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPKTB_1087_G1342.1_173772302
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPKTB_1087_G1342.1_173772302

Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803151G>C COSM376158 LUAD-NYU704 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p acatCCACAGGatgc CCUGUGGG m7a Created HPKTB_1087_G1342.1_173772302
hsa-miR-1914-5p acatcCACAGGatgc CCCUGUGC m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-326 acatCCAGAGGatgc CCUCUGGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-3691-5p aCATCCACaggatgc AGUGGAUG m7b Created HPKTB_1087_G1342.1_173772302
hsa-miR-376b-5p acATCCACaggatgc CGUGGAUA m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-376c-5p acATCCACaggatgc GGUGGAUA m6b Created HPKTB_1087_G1342.1_173772302
hsa-miR-432-3p aCATCCAGaggatgc CUGGAUGG m7a Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-4752 acATCCACAggatgc UUGUGGAU m7b (m6b->m7b) HPKTB_1087_G1342.1_173772302
hsa-miR-4782-5p acATCCAGAggatgc UUCUGGAU m7b (m7b->m6b) HPKTB_1087_G1342.1_173772302
hsa-miR-4793-5p acatccaCAGGATGc ACAUCCUG m7b Created HPKTB_1087_G1342.1_173772302
hsa-miR-518c-5p acaTCCAGAGgatgc UCUCUGGA m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-5196-3p acatccaGAGGATGc UCAUCCUC m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-5706 acATCCAGAggatgc UUCUGGAU m7b (m7b->m6b) HPKTB_1087_G1342.1_173772302
hsa-miR-6780a-3p acatcCAGAGGAtgc CUCCUCUG m7b Disrupted HPKTB_1087_G1342.1_173772302
hsa-miR-7114-5p acaTCCACAGgatgc UCUGUGGA m7b Created HPKTB_1087_G1342.1_173772302
hsa-miR-8056 acATCCACaggatgc CGUGGAUU m6b Created HPKTB_1087_G1342.1_173772302

Mutation Mutation ID Sample Name Cancer Type
chr1:g.173800173A>T COSN1092758 HCC70T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p atCTTTATatatata CAUAAAGU m6b Created HPKTB_1086_G1341.1_173769303
hsa-miR-190a-3p atctttATATATAta CUAUAUAU m7b Created HPKTB_1086_G1341.1_173769303
hsa-miR-340-5p atCTTTATAtatata UUAUAAAG m7b (m6b->m7b) HPKTB_1086_G1341.1_173769303
hsa-miR-410-3p atctTTATATatata AAUAUAAC m6b Created HPKTB_1086_G1341.1_173769303
hsa-miR-5011-5p atcttTATATATAta UAUAUAUA m8a Created HPKTB_1086_G1341.1_173769303
hsa-miR-5590-3p atCTTTATatatata AAUAAAGU m6b Created HPKTB_1086_G1341.1_173769303

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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