SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001114636
Gene Symbol: FANCL
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.58159660C>G COSM390143 LUAD_E01047 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6516-3p ctaACATGAaaagga AUCAUGUA m6b Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929
hsa-miR-335-3p ctaacATGAAAAgga UUUUUCAU m7b Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929

Mutation Mutation ID Sample Name Cancer Type
chr2:g.58159643T>C COSM5004366 PAPJIB [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_B_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-154-3p gGTATGATgatgcga AAUCAUAC m7b Disrupted HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929

Mutation Mutation ID Sample Name Cancer Type
chr2:g.58159638C>T COSM1021951 TCGA-D1-A167-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23c gatgATGTGATaata AUCACAUU m7a Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929
hsa-miR-23b-3p gatgATGTGATaata AUCACAUU m7a Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929
hsa-miR-23a-3p gatgATGTGATaata AUCACAUU m7a Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929

Mutation Mutation ID Sample Name Cancer Type
chr2:g.58159628A>C COSM1232408 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4795-3p tAATAATAaacatct AUAUUAUU m7b Disrupted HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929

Mutation Mutation ID Sample Name Cancer Type
chr2:g.58159627A>C COSM4094954 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-576-3p aataataCACATCTg AAGAUGUG m7b Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929
hsa-miR-511-3p aataaTACACATctg AAUGUGUA m7b Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929
hsa-miR-223-5p aatAATACACatctg CGUGUAUU m7b Created HHKTB_3521_NM_001114636|1308|1347|31.493191669222|1.0332853061929

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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