SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001114634
Gene Symbol: PLAG1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166715C>T COSM1176975 T155 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p gcaATTTTTattcct CAAAAAUC m6b Created HPSD3_9938_G13480.1_57079270
hsa-miR-5680 gcaATTTCTattcct GAGAAAUG m6b Disrupted HPSD3_9938_G13480.1_57079270
hsa-miR-5680 gcaATTTCTattcct GAGAAAUG m6b Disrupted HPSD3_9938_G13480.1_57079270
hsa-miR-548c-3p gcaATTTTTattcct CAAAAAUC m6b Created HPSD3_9938_G13480.1_57079270

Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166710C>T COSM3649950 TCGA-EB-A4IS-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3942-3p ttctattTCTGAAAa UUUCAGAU m7a Created HPSD3_9938_G13480.1_57079270
hsa-miR-3121-3p tTCTATTTctgaaaa UAAAUAGA m7b Created HPSD3_9938_G13480.1_57079270
hsa-miR-873-5p ttctaTTCCTGaaaa GCAGGAAC m6b Disrupted HPSD3_9938_G13480.1_57079270
hsa-miR-873-5p ttctaTTCCTGaaaa GCAGGAAC m6b Disrupted HPSD3_9938_G13480.1_57079270
hsa-miR-3121-3p tTCTATTTctgaaaa UAAAUAGA m7b Created HPSD3_9938_G13480.1_57079270
hsa-miR-3942-3p ttctattTCTGAAAa UUUCAGAU m7a Created HPSD3_9938_G13480.1_57079270

Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166627T>C COSM121571 HN_63021 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-924 cccAAGACTCTcaag AGAGUCUU m8a Created HPSD3_9937_G13479.1_57079162
hsa-miR-580-3p cccaagATTCTCAAg UUGAGAAU m8a Disrupted HPSD3_9937_G13479.1_57079162
hsa-miR-5007-5p cccaAGACTCTcaag UAGAGUCU m7b Created HPSD3_9937_G13479.1_57079162
hsa-miR-4693-3p cccaagACTCTCAag UGAGAGUG m7a Created HPSD3_9937_G13479.1_57079162
hsa-miR-924 cccAAGACTCTcaag AGAGUCUU m8a Created HPSD3_9937_G13479.1_57079162
hsa-miR-580-3p cccaagATTCTCAAg UUGAGAAU m8a Disrupted HPSD3_9937_G13479.1_57079162
hsa-miR-5007-5p cccaAGACTCTcaag UAGAGUCU m7b Created HPSD3_9937_G13479.1_57079162
hsa-miR-4693-3p cccaagACTCTCAag UGAGAGUG m7a Created HPSD3_9937_G13479.1_57079162

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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