SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980708A>C COSM3745179 RK212_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3188 gattcAGCCTCaggc AGAGGCUU m6b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-3929 gatTCAGCCTCaggc GAGGCUGA m8a Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-4419b gatTCAGCCTCaggc GAGGCUGA m8a Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-4478 gatTCAGCCTCaggc GAGGCUGA m8a Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-4649-3p gattcaGCCTCAGgc UCUGAGGC m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-485-5p gattCAGCCTCaggc AGAGGCUG m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-544b gattcagCCTCAGGc ACCUGAGG m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-627-5p gattcAGACTCAggc GUGAGUCU m7b Disrupted HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-6884-5p gattCAGCCTCaggc AGAGGCUG m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-924 gattcAGACTCaggc AGAGUCUU m6b Disrupted HHRBC_11171_BC3-2of3-SCL_6268

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980690C>A COSM4936396 TCGA-BC-A112-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-200c-5p tcgtctTAAGACacc CGUCUUAC m6b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-208a-3p tCGTCTTAagacacc AUAAGACG m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-208b-3p tCGTCTTAagacacc AUAAGACG m7b Created HHRBC_11171_BC3-2of3-SCL_6268
hsa-miR-4711-3p tcgtcttAAGACACc CGUGUCUU m7b Created HHRBC_11171_BC3-2of3-SCL_6268

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980608G>A COSM328185 Capan-1 [pancreas][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p atcctCTGCACagca GGUGCAGU m6b Disrupted HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-2467-3p atCCTCTGCacagca AGCAGAGG m7b (m7b->m6b) HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-3678-3p atcCTCTGCAcagca CUGCAGAG m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-6832-5p atcCTCTACacagca AGUAGAGA m6b Created HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-6847-5p aTCCTCTGcacagca ACAGAGGA m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-877-5p aTCCTCTACacagca GUAGAGGA m8a (m7a->m8a) HHRBC_11170_BC3-2of3-SCL_6600

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980593A>G COSM259665 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-5p tgAGAAAGCagagtc GGCUUUCU m7b (m6b->m7b) HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-3664-5p tgagaaaACAGAGTc AACUCUGU m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-6728-3p tgagaaAGCAGAGtc UCUCUGCU m7b Created HHRBC_11170_BC3-2of3-SCL_6600

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980587G>A COSM3625571 TCGA-EE-A3AA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-5p agCGAATGAgaaaac UUCAUUCG m7b (m7b->m6b) HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-6758-3p agcGAATGAGaaaac ACUCAUUC m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980583G>A COSM185824 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-5p ctgcagCGAATGAga UUCAUUCG m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-5696 ctgcagcAAATGAGa CUCAUUUA m7a Created HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-579-3p ctgcagCAAATGAga UUCAUUUG m7b Created HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-639 ctGCAGCGAatgaga AUCGCUGC m7b (m7b->m6b) HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-664b-3p ctgcagCAAATGAga UUCAUUUG m7b Created HHRBC_11170_BC3-2of3-SCL_6600
hsa-miR-6758-3p ctgcagcGAATGAGa ACUCAUUC m7b Disrupted HHRBC_11170_BC3-2of3-SCL_6600

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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