SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980661C>T COSM3625572 TCGA-EE-A3J8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4487 cagattCCAGCTCct AGAGCUGG m7b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-6500-5p cagattcTAGCTCCt AGGAGCUA m7b Created HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-6128 cagATTCCAGctcct ACUGGAAU m7b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-4633-3p cagattcTAGCTCCt AGGAGCUA m7b Created HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32980654C>CA COSM1077934 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4303 tccaGCTCAGAttcc UUCUGAGC m7b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-4487 tCCAGCTCagattcc AGAGCUGG m7b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-526b-5p tccagCTCAAGAttcc CUCUUGAG m7b Created HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-6751-3p tccaGCTCAGattcc ACUGAGCC m6b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-3200-5p tccagCTCAGATTcc AAUCUGAG m8a Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-3160-3p tcCAGCTCagattcc AGAGCUGA m6b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603
hsa-miR-1199-5p tccaGCTCAGattcc CCUGAGCC m6b Disrupted HHKTB_1476_NM_005104|4026|4065|51.5908205633966|11.3499379166603

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32976739C>T COSM1742858 GB16 [biliary_tract][gallbladder][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4639-5p tgactCTTAGCAAca UUGCUAAG m8a Created HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-4663 tgactCTCAGCaaca AGCUGAGC m6b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-8077 tgactCTCAGCaaca GGCUGAGU m6b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-7160-5p tgactCTCAGCAaca UGCUGAGG m7a Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-6761-5p tgaCTCTCAGcaaca UCUGAGAG m7b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-628-5p tgactcTCAGCAaca AUGCUGAC m6b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32976735C>A COSM5002984 PDA_089 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-506-5p tgCCTGAATctcagc UAUUCAGG m7b (m6b->m7b) HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-5186 tgcctgAATCTCagc AGAGAUUG m6b Created HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-5702 tgcCTGACTCtcagc UGAGUCAG m7b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603
hsa-miR-6761-5p tgcctgaCTCTCAGc UCUGAGAG m7b Disrupted HHKTB_2800_NM_005104|2690|2729|36.4658008801518|11.3499379166603

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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