SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32976419G>T COSM742388 TCGA-33-4566-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4428 gacccccTCTCCTTg CAAGGAGA m7b Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-4781-5p gacCCCCGCTccttg UAGCGGGG m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-4787-5p gACCCCCGCtccttg GCGGGGGU m8a (m8a->m7a) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-6732-5p gACCCCCTctccttg UAGGGGGU m7b Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32976406C>T COSM4987323 RMS111_ [soft_tissue][striated_muscle][rhabdomyosarcoma][alveolar]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p ttGCACTTTgctgga AAAAGUGC m7b (m6b->m7b) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-106b-5p ttGCACTTTgctgga UAAAGUGC m7b (m6b->m7b) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-17-5p ttGCACTTTGctgga CAAAGUGC m8a Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-20a-5p ttGCACTTTgctgga UAAAGUGC m7b (m6b->m7b) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-20b-5p ttGCACTTTGctgga CAAAGUGC m8a Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-4530 ttgcactCTGCTGGa CCCAGCAG m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-519a-3p tTGCACTTTgctgga AAAGUGCA m8a (m7a->m8a) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-519b-3p tTGCACTTTgctgga AAAGUGCA m8a (m7a->m8a) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-519c-3p tTGCACTTTgctgga AAAGUGCA m8a (m7a->m8a) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-519d-3p ttGCACTTTGctgga CAAAGUGC m8a Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-520g-3p ttgCACTTTGctgga ACAAAGUG m7b Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-520h ttgCACTTTGctgga ACAAAGUG m7b Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-526b-3p ttGCACTTTgctgga GAAAGUGC m7b (m6b->m7b) HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-545-3p ttgcacTTTGCTGga UCAGCAAA m7b Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-759 ttgCACTCTGCtgga GCAGAGUG m8a Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-922 ttgcacTCTGCTGga GCAGCAGA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-93-5p ttGCACTTTGctgga CAAAGUGC m8a Created HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32976403A>G COSM1734279 ACINAR29 [pancreas][NS][carcinoma][acinar_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-130b-3p tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-301a-3p tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-301b-3p tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-3666 tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-4295 tccTTGCACTctgct CAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-454-3p tccTTGCACTctgct UAGUGCAA m7b Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094
hsa-miR-759 tccttgCACTCTGCt GCAGAGUG m8a Disrupted HHHSH_378_BRD2|NM_001199455-1|exon_CDS|-8.15413158163181|-0.755855182461094

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975433G>C COSM1546129 TCGA-69-7979-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-200c-5p atTAAGACGagactt CGUCUUAC m7a (m6a->m7a) HHHSH_377_BRD2|NM_001199455-1|exon_CDS|-8.55268816753212|0.74250948350278
hsa-miR-4279 attaaGAGGAGActt CUCUCCUC m7b Disrupted HHHSH_377_BRD2|NM_001199455-1|exon_CDS|-8.55268816753212|0.74250948350278
hsa-miR-6780a-3p attaAGAGGAGactt CUCCUCUG m7a Disrupted HHHSH_377_BRD2|NM_001199455-1|exon_CDS|-8.55268816753212|0.74250948350278
hsa-miR-6881-3p attAAGAGGAgactt AUCCUCUU m7b Disrupted HHHSH_377_BRD2|NM_001199455-1|exon_CDS|-8.55268816753212|0.74250948350278

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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