SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001111097
Gene Symbol: LYN
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.55999497C>T COSM3649933 TCGA-D3-A2JC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6816-3p tgtGGTCCTTtggaa GAAGGACC m7b Disrupted HHKTB_2456_NM_002350|1546|1585|38.7449134351613|0.391205166842714

Mutation Mutation ID Sample Name Cancer Type
chr8:g.55999479T>G COSM1292713 CLL103 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-633 tcACTATTAagtctg CUAAUAGU m7b (m7b->m6b) HHKTB_2456_NM_002350|1546|1585|38.7449134351613|0.391205166842714
hsa-miR-376b-3p tcaCTATGAagtctg AUCAUAGA m6b Created HHKTB_2456_NM_002350|1546|1585|38.7449134351613|0.391205166842714
hsa-miR-376a-3p tcaCTATGAagtctg AUCAUAGA m6b Created HHKTB_2456_NM_002350|1546|1585|38.7449134351613|0.391205166842714

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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