SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001102668
Gene Symbol: PSMA4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.78548811G>C COSM349110 LUAD-YINHD [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-367-5p ctaaCAACAGagaat ACUGUUGC m6b Created HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-4768-5p ctaacaaGAGAGAAt AUUCUCUC m7b Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-6817-3p ctaacaAGAGAGAat UCUCUCUG m7a Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-6833-3p ctaacaaGAGAGAAt UUUCUCUC m7b Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-6873-3p ctaacaAGAGAGAAt UUCUCUCU m8a Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-7110-3p ctaacaAGAGAGAat UCUCUCUC m7a Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-1267 ctaaCAACAGagaat CCUGUUGA m6b Created HHRBC_4619_BC3-2of3-SCL_4201

Mutation Mutation ID Sample Name Cancer Type
chr15:g.78548802C>T COSM4617613 C135 [large_intestine][right][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-367-3p atTGCAATactaaca AAUUGCAC m6b Created HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-363-3p atTGCAATactaaca AAUUGCAC m6b Created HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-3591-5p attgcaACACTAAca UUUAGUGU m7b Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-25-3p atTGCAATactaaca CAUUGCAC m6b Created HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-4255 attgcAACACTaaca CAGUGUUC m6b Disrupted HHRBC_4619_BC3-2of3-SCL_4201
hsa-miR-4684-3p aTTGCAACActaaca UGUUGCAA m8a (m8a->m7a) HHRBC_4619_BC3-2of3-SCL_4201

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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