SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | NM_001100880 |
---|---|
Gene Symbol: | ST20 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.79899001C>T | COSM3999612 | SNUH_G10_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-122-5p | gACACTCCAtattgt | UGGAGUGU | m8a | (m8a->m7a) | HPSLC_7270_G8593.1_80191342 |
hsa-miR-8076 | gacacTCCATATtgt | UAUAUGGA | m7b | Disrupted | HPSLC_7270_G8593.1_80191342 |
hsa-miR-6514-5p | gacACTCCATAttgt | UAUGGAGU | m8a | Disrupted | HPSLC_7270_G8593.1_80191342 |
hsa-miR-5586-3p | gaCACTCTatattgt | CAGAGUGA | m6b | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-504-3p | gaCACTCCatattgt | GGGAGUGC | m6b | Disrupted | HPSLC_7270_G8593.1_80191342 |
hsa-miR-5583-3p | gacactCCATATTgt | GAAUAUGG | m7b | Disrupted | HPSLC_7270_G8593.1_80191342 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.79898987G>A | COSM196715 | TCGA-AA-3864-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1295a | tgaaacCGGCCTAAt | UUAGGCCG | m8a | Disrupted | HPSLC_7270_G8593.1_80191342 |
hsa-miR-29b-1-5p | tgAAACCAGCctaat | GCUGGUUU | m8a | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-29b-2-5p | tGAAACCAGcctaat | CUGGUUUC | m8a | (m7a->m8a) | HPSLC_7270_G8593.1_80191342 |
hsa-miR-3929 | tgaaacCAGCCTaat | GAGGCUGA | m6b | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-4430 | tgaaaCCAGCCTaat | AGGCUGGA | m7a | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-4419b | tgaaacCAGCCTaat | GAGGCUGA | m6b | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-4505 | tgaaaCCAGCCTaat | AGGCUGGG | m7a | Created | HPSLC_7270_G8593.1_80191342 |
hsa-miR-4478 | tgaaacCAGCCTaat | GAGGCUGA | m6b | Created | HPSLC_7270_G8593.1_80191342 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.79898986G>A | COSM4623189 | DLD1 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1295a | gaaacCGGCCTAAtt | UUAGGCCG | m8a | Disrupted | HPSLC_7270_G8593.1_80191342 |
hsa-miR-431-3p | gaaacCGACCTaatt | CAGGUCGU | m6b | Created | HPSLC_7270_G8593.1_80191342 |