SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001100
Gene Symbol: ACTA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432657G>A COSM1600146 SK0115_M [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-5p gcCAACCACgagaag GGUGGUUG m7b (m6b->m7b) HHRBC_1368_BC3-2of3-SCL_9370
hsa-miR-3677-3p gccaaCCACGAGaag CUCGUGGG m7a Created HHRBC_1368_BC3-2of3-SCL_9370
hsa-miR-579-5p gccAACCGCGAgaag UCGCGGUU m8a Disrupted HHRBC_1368_BC3-2of3-SCL_9370

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432643C>A COSM383002 LUAD-RT-S01813 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p gatgaCCCAGATcat CAUCUGGG m7b Disrupted HHRBC_1368_BC3-2of3-SCL_9370
hsa-miR-5587-5p gaTGACCAagatcat AUGGUCAC m6b Created HHRBC_1368_BC3-2of3-SCL_9370
hsa-miR-6861-5p gatgACCCAGatcat ACUGGGUA m6b Disrupted HHRBC_1368_BC3-2of3-SCL_9370

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432609T>C COSM1339917 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-942-3p cccGCCATGTacgtg CACAUGGC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432604G>A COSM1601864 HCC71T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p catgtacATGGCCAt UUGGCCAU m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-4529-5p catgtacATGGCCat AGGCCAUC m6b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-4701-5p catgtacGTGGCCAt UUGGCCAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-493-5p cATGTACAtggccat UUGUACAU m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-588 catgtacGTGGCCAt UUGGCCAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432602G>A COSM4546838 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4701-5p tgtacGTGGCCAtcc UUGGCCAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-588 tgtacGTGGCCAtcc UUGGCCAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432596C>T COSM679189 TCGA-33-4566-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 tggCCATCCaggccg GGGAUGGU m6b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-1254 tggccaTCCAGGCcg AGCCUGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-3116 tggccaTCCAGGCcg UGCCUGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-3140-5p tggccATTCAGGccg ACCUGAAU m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-432-3p tggCCATCCAGgccg CUGGAUGG m8a Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432596C>A COSM533315 TCGA-64-1676-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 tggCCATCCaggccg GGGAUGGU m6b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-1254 tggccaTCCAGGCcg AGCCUGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-3116 tggccaTCCAGGCcg UGCCUGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-432-3p tggCCATCCAGgccg CUGGAUGG m8a Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6735-3p tggccatACAGGCCg AGGCCUGU m7b Created HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432581C>T COSM4957300 CHC451T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3126-5p tgctGTCCCTCtacg UGAGGGAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-4524a-3p tgCTGTCTCtctacg UGAGACAG m7b (m6b->m7b) HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6832-5p tgctgtcTCTCTACg AGUAGAGA m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6856-5p tgctgtCTCTCTacg AAGAGAGG m6b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6873-5p tgctgTCCCTCTacg CAGAGGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6875-5p tgctGTCCCTCtacg UGAGGGAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-7845-5p tgcTGTCCCTctacg AAGGGACA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432581C>G COSM679190 TCGA-56-6545-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196b-3p tGCTGTCGctctacg UCGACAGC m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-3126-5p tgctGTCCCTCtacg UGAGGGAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-4732-5p tgctgtcGCTCTACg UGUAGAGC m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6873-5p tgctgTCCCTCTacg CAGAGGGA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-6875-5p tgctGTCCCTCtacg UGAGGGAC m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-7845-5p tgcTGTCCCTctacg AAGGGACA m7b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432575C>T COSM1339916 TCGA-F1-6177-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3612 ccctctaTGCCTCCg AGGAGGCA m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-650 ccctctaTGCCTCCg AGGAGGCA m7b Created HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432564G>A COSM3864721 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-431-5p tccgGCAAGACcacc UGUCUUGC m7b Created HHRBC_1367_BC3-2of3-SCL_11676
hsa-miR-4722-3p tccGGCAGGaccacc ACCUGCCA m6b Disrupted HHRBC_1367_BC3-2of3-SCL_11676

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432171G>A COSM4029314 TCGA-BR-8081-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7641 cGAGATCAtgcgcga UUGAUCUC m7b Created HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432164A>G COSM1997439 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-5p gtgcgcGACATCaag AGAUGUCC m6b Disrupted HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-3648 gtgCGCGGCatcaag AGCCGCGG m6b Created HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-6869-3p gtGCGCGGCatcaag CGCCGCGC m7b (m6b->m7b) HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432160C>G COSM3789614 TCGA-CU-A3QU-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p gcgacATGAAGGAga UCCUUCAU m8a Created HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-219b-5p gcGACATCaaggaga AGAUGUCC m6b Disrupted HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-6516-3p gcgACATGAaggaga AUCAUGUA m6b Created HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432146G>A COSM673780 FM474T [endometrium][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-585-5p aagcTGTGCTAcgtg CUAGCACA m7b Disrupted HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432141G>A COSM3356534 tumor_4177376 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6508-3p gtgctacATGGCCCt UGGGCCAU m7b Created HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229432137C>T COSM1238126 ESO-859 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3918 tacgtGGCCCTGgac ACAGGGCC m7b Disrupted HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-4685-5p tacgtgGCCCTGGac CCCAGGGC m7b Disrupted HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-665 tacgtggTCCTGGac ACCAGGAG m6b Created HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-6837-5p tacgtgGCCCTGGac ACCAGGGC m7b Disrupted HHRBC_1366_BC3-2of3-SCL_12954
hsa-miR-6895-5p tacgTGGCCCTGgac CAGGGCCA m8a Disrupted HHRBC_1366_BC3-2of3-SCL_12954

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229431627G>A COSM1473574 TCGA-C8-A274-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1469 ccCGCCGAagcgcaa CUCGGCGC m6b Created HHRBC_1365_BC3-2of3-SCL_10231

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229431601C>T COSM4659085 T2941 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-505-5p ggatcggTGGCTCCa GGGAGCCA m7b Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-6746-3p ggatcGGCGGCTcca CAGCCGCC m7b Disrupted HHRBC_1365_BC3-2of3-SCL_10231

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229431599G>A COSM1243063 ESO-081 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3198 atcggcGACTCCAtc GUGGAGUC m7b Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-4294 atcggcGACTCCatc GGGAGUCU m6b Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-4309 atcggcGACTCCAtc CUGGAGUC m7b Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-505-5p atcggcGGCTCCatc GGGAGCCA m6b Disrupted HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-6514-5p atcggcgACTCCATc UAUGGAGU m7b Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-6746-3p atcGGCGGCTccatc CAGCCGCC m7b Disrupted HHRBC_1365_BC3-2of3-SCL_10231

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229431596C>T COSM3484906 TCGA-GN-A263-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2392 ggcggctCCATCCTg UAGGAUGG m7b Disrupted HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-4534 ggcggCTCCATCCtg GGAUGGAG m8a Disrupted HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-505-5p ggcGGCTCCatcctg GGGAGCCA m6b Disrupted HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-7843-3p ggcGGCTTCATcctg AUGAAGCC m8a Created HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-8082 ggcggCTCCATCctg UGAUGGAG m7b Disrupted HHRBC_1365_BC3-2of3-SCL_10231

Mutation Mutation ID Sample Name Cancer Type
chr1:g.229431584C>G COSM3369596 TCGA-DO-A2HM-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2277-3p ctggcctCGCTGTCc UGACAGCG m7b Disrupted HHRBC_1365_BC3-2of3-SCL_10231
hsa-miR-4755-3p ctgGCCTGGCTgtcc AGCCAGGC m8a Created HHRBC_1365_BC3-2of3-SCL_10231

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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