SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099858
Gene Symbol: C7orf25

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.42910175C>T COSM3881046 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4714-3p ttaAGGTTGatgtgt CCAACCUA m6b Created HPTA1_10633_G15208.1_42949769
hsa-miR-4714-3p ttaAGGTTGatgtgt CCAACCUA m6b Created HPTA1_10633_G15208.1_42949769
Mutation Mutation ID Sample Name Cancer Type
chr7:g.42910175C>A COSM259855 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr7:g.42910171G>A COSM4779090 RK326_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5589-3p ggtcgatATGTGCAa UGCACAUG m7a Created HPTA1_10633_G15208.1_42949769
hsa-miR-8064 ggtcgatGTGTGCaa AGCACACU m6b Disrupted HPTA1_10633_G15208.1_42949769
hsa-miR-5589-3p ggtcgatATGTGCAa UGCACAUG m7a Created HPTA1_10633_G15208.1_42949769
hsa-miR-8064 ggtcgatGTGTGCaa AGCACACU m6b Disrupted HPTA1_10633_G15208.1_42949769

Mutation Mutation ID Sample Name Cancer Type
chr7:g.42910162A>C COSM4867301 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1282 gtGCAAACGAgtaaa UCGUUUGC m8a Created HPTA1_10633_G15208.1_42949769
hsa-miR-130b-5p gtgcaAAAGAGTaaa ACUCUUUC m7a Disrupted HPTA1_10633_G15208.1_42949769
hsa-miR-4636 gtgcaaACGAGTaaa AACUCGUG m6b Created HPTA1_10633_G15208.1_42949769
hsa-miR-507 GTGCAAAAgagtaaa UUUUGCAC m8a Disrupted HPTA1_10633_G15208.1_42949769
hsa-miR-557 GTGCAAACgagtaaa GUUUGCAC m8a Created HPTA1_10633_G15208.1_42949769
hsa-miR-5707 gtgCAAACGagtaaa ACGUUUGA m6b Created HPTA1_10633_G15208.1_42949769
hsa-miR-1282 gtGCAAACGAgtaaa UCGUUUGC m8a Created HPTA1_10633_G15208.1_42949769
hsa-miR-130b-5p gtgcaAAAGAGTaaa ACUCUUUC m7a Disrupted HPTA1_10633_G15208.1_42949769
hsa-miR-4636 gtgcaaACGAGTaaa AACUCGUG m6b Created HPTA1_10633_G15208.1_42949769
hsa-miR-507 GTGCAAAAgagtaaa UUUUGCAC m8a Disrupted HPTA1_10633_G15208.1_42949769
hsa-miR-557 GTGCAAACgagtaaa GUUUGCAC m8a Created HPTA1_10633_G15208.1_42949769
hsa-miR-5707 gtgCAAACGagtaaa ACGUUUGA m6b Created HPTA1_10633_G15208.1_42949769

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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