SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099650
Gene Symbol: GXYLT1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.42087203G>C COSN9749903 C0068T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5047 gtaAGCTGCAtgtta UUGCAGCU m7b Disrupted HPSLB_1911_G2314.1_42481011
hsa-miR-6500-5p gtaAGCTCCatgtta AGGAGCUA m6b Created HPSLB_1911_G2314.1_42481011
hsa-miR-6874-5p gtaAGCTCCATgtta AUGGAGCU m8a Created HPSLB_1911_G2314.1_42481011
hsa-miR-4802-3p gtaagcTCCATGTta UACAUGGA m7b Created HPSLB_1911_G2314.1_42481011
hsa-miR-4633-3p gtaAGCTCCatgtta AGGAGCUA m6b Created HPSLB_1911_G2314.1_42481011
hsa-miR-27b-5p gTAAGCTCcatgtta AGAGCUUA m7b Created HPSLB_1911_G2314.1_42481011
hsa-miR-1301-3p gtaAGCTGCAtgtta UUGCAGCU m7b Disrupted HPSLB_1911_G2314.1_42481011

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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