SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099639
Gene Symbol: ZNF146

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36237209C>G COSM3822807 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p ccttgCTCTGCattt AGCAGAGG m6b Disrupted HPTA1_5702_G8058.1_36728106
hsa-miR-3120-3p ccTTGCTGTGcattt CACAGCAA m8a Created HPTA1_5702_G8058.1_36728106
hsa-miR-3678-3p ccttgCTCTGCAttt CUGCAGAG m7b Disrupted HPTA1_5702_G8058.1_36728106
hsa-miR-6501-3p cctTGCTCTGcattt CCAGAGCA m7b Disrupted HPTA1_5702_G8058.1_36728106

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36237027G>A COSM995411 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-628-5p tcTCAGCAaacatca AUGCUGAC m6b Created HPTA1_5701_G8057.1_36727930
hsa-miR-639 tctCAGCGAacatca AUCGCUGC m6b Disrupted HPTA1_5701_G8057.1_36727930

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236738T>A COSM4570622 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-888-5p aaaacctTTTGAGTg UACUCAAA m7b Disrupted HPTA1_5700_G8056.1_36727616
hsa-miR-371b-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPTA1_5700_G8056.1_36727616
hsa-miR-373-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPTA1_5700_G8056.1_36727616
hsa-miR-616-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPTA1_5700_G8056.1_36727616
hsa-miR-6826-5p aaaaCCTATTGAgtg UCAAUAGG m8a Created HPTA1_5700_G8056.1_36727616

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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