SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099639
Gene Symbol: ZNF146

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236879G>C COSM130359 HN_63058 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3192-3p tgagcATCAGAaaat CUCUGAUC m6b Created HPKTB_5310_G6700.1_36727770
hsa-miR-4502 tgagCATCAGaaaat GCUGAUGA m6b Created HPKTB_5310_G6700.1_36727770
hsa-miR-4762-3p tgagcATCAGAAaat CUUCUGAU m7b Created HPKTB_5310_G6700.1_36727770
Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236878T>C COSM4077350 TCGA-BR-7707-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236582G>A COSM995407 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-3p atgtaacAAGTGTGg ACACACUU m7b Created HPKTB_5309_G6699.1_36727473
hsa-miR-6500-3p atgtaACAAGTGTgg ACACUUGU m8a Created HPKTB_5309_G6699.1_36727473

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236574A>T COSM4602016 WSU-HN6 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-181b-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-181c-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-181d-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-4262 cctttTGAATGTaac GACAUUCA m7b Disrupted HPKTB_5309_G6699.1_36727473

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236569T>G COSM1304467 TCGA-BT-A20R-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-553 agaaACCGTTTgaat AAAACGGU m7b Created HPKTB_5309_G6699.1_36727473
hsa-miR-6715b-3p agaaaccGTTTGAat CUCAAACC m6b Created HPKTB_5309_G6699.1_36727473

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236563G>T COSM995406 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p cgAGAGATaaacctt CAUCUCUA m6b Created HPKTB_5309_G6699.1_36727473
hsa-miR-4768-5p cgaGAGAGAAacctt AUUCUCUC m7b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-6809-3p cgagAGAGAAacctt CUUCUCUU m6b Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-6817-3p cgAGAGAGAaacctt UCUCUCUG m7a (m7a->m6a) HPKTB_5309_G6699.1_36727473
hsa-miR-6833-3p cgaGAGAGAAAcctt UUUCUCUC m8a Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-6873-3p cgAGAGAGAAacctt UUCUCUCU m8a Disrupted HPKTB_5309_G6699.1_36727473
hsa-miR-7110-3p cGAGAGAGAaacctt UCUCUCUC m8a (m8a->m7a) HPKTB_5309_G6699.1_36727473

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser