SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001098534
Gene Symbol: BAG6

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31641165T>C COSM3861742 TCGA-HU-A4GT-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p ctGGCCCCAaacctg GUGGGGCC m7b (m6b->m7b) HPSLB_6546_G7988.1_31608937
hsa-miR-1296-5p ctGGCCCTAAacctg UUAGGGCC m8a Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-2909 ctgGCCCTAAacctg GUUAGGGC m7b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4260 ctgGCCCCAAacctg CUUGGGGC m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-4464 ctggcccCAAACCTg AAGGUUUG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-450a-2-3p ctggCCCCAAacctg AUUGGGGA m6b Created HPSLB_6546_G7988.1_31608937
hsa-miR-4512 ctGGCCCTaaacctg CAGGGCCU m6b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4726-5p CTGGCCCTaaacctg AGGGCCAG m8a Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4748 ctggcccCAAACCTg GAGGUUUG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-5572 ctggCCCCAAacctg GUUGGGGU m6b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6740-5p ctggcCCCAAACctg AGUUUGGG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6762-5p cTGGCCCCaaacctg CGGGGCCA m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6845-5p cTGGCCCCaaacctg CGGGGCCA m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6895-5p cTGGCCCTaaacctg CAGGGCCA m7b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-7160-3p ctGGCCCTaaacctg CAGGGCCC m6b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-1227-5p ctGGCCCCAaacctg GUGGGGCC m7b (m6b->m7b) HPSLB_6546_G7988.1_31608937
hsa-miR-1296-5p ctGGCCCTAAacctg UUAGGGCC m8a Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-2909 ctgGCCCTAAacctg GUUAGGGC m7b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4260 ctgGCCCCAAacctg CUUGGGGC m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-4464 ctggcccCAAACCTg AAGGUUUG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-450a-2-3p ctggCCCCAAacctg AUUGGGGA m6b Created HPSLB_6546_G7988.1_31608937
hsa-miR-4512 ctGGCCCTaaacctg CAGGGCCU m6b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4726-5p CTGGCCCTaaacctg AGGGCCAG m8a Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-4748 ctggcccCAAACCTg GAGGUUUG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-5572 ctggCCCCAAacctg GUUGGGGU m6b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6740-5p ctggcCCCAAACctg AGUUUGGG m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6762-5p cTGGCCCCaaacctg CGGGGCCA m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6845-5p cTGGCCCCaaacctg CGGGGCCA m7b Created HPSLB_6546_G7988.1_31608937
hsa-miR-6895-5p cTGGCCCTaaacctg CAGGGCCA m7b Disrupted HPSLB_6546_G7988.1_31608937
hsa-miR-7160-3p ctGGCCCTaaacctg CAGGGCCC m6b Disrupted HPSLB_6546_G7988.1_31608937

Mutation Mutation ID Sample Name Cancer Type
chr6:g.31641148G>T COSM4858677 TCGA-39-5016-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4286 ctgcttGTGGGGaca ACCCCACU m6b Created HPSLB_6546_G7988.1_31608937
hsa-miR-4286 ctgcttGTGGGGaca ACCCCACU m6b Created HPSLB_6546_G7988.1_31608937

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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