| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001098268 |
|---|---|
| Gene Symbol: | LIG4 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr13:g.108210643A>G | COSM3710998 | 44T | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-7112-3p | tttcataGTGATGCt | UGCAUCAC | m7b | Created | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-34c-3p | tttcaTAGTGATgct | AAUCACUA | m7b | Created | HPSLC_5781_G6873.1_108862987 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr13:g.108210632G>A | COSM4554966 | CSCC-44-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-374b-3p | tgCTGCTAAGttgca | CUUAGCAG | m8a | Created | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-374c-3p | tgctGCTAAGTtgca | CACUUAGC | m7b | Created | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-424-5p | TGCTGCTGagttgca | CAGCAGCA | m8a | Disrupted | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-4291 | tgCTGCTGAgttgca | UUCAGCAG | m7b | (m7b->m6b) | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-512-5p | tgctGCTGAGTtgca | CACUCAGC | m7b | Disrupted | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-891b | tgctgctAAGTTGCa | UGCAACUU | m7b | Created | HPSLC_5781_G6873.1_108862987 |
| hsa-miR-922 | tgCTGCTGagttgca | GCAGCAGA | m6b | Disrupted | HPSLC_5781_G6873.1_108862987 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr13:g.108210314T>A | COSM4970446 | SJHGG034_D | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-5700 | taATGCATTcaaagc | UAAUGCAU | m7b | (m7b->m6b) | HPSLC_5780_G6872.1_108862666 |
| hsa-miR-586 | tAATGCATtcaaagc | UAUGCAUU | m7b | Disrupted | HPSLC_5780_G6872.1_108862666 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr13:g.108210311A>T | COSM432093 | TCGA-A8-A07R-01 | [breast][NS][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1251-3p | tgcattCAAAGCaga | CGCUUUGC | m6b | Disrupted | HPSLC_5780_G6872.1_108862666 |